Examples of 'indels' in a sentence
Meaning of "indels"
indels (noun) - a portmanteau of 'insertion' and 'deletion,' used in genetics to refer to a type of mutation involving the insertion or deletion of nucleotides in a DNA sequence
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- plural of indel
How to use "indels" in a sentence
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indels
Indels can be contrasted with a point mutation.
Not sure how to deal with indels.
The percentage of indels is indicated below the lanes.
Detection of SNVs and small INDELs.
The percent indels are shown at the bottom of each lane.
Most past studies have focused on point mutations and small InDels.
These indels were reported to be equally represented in the chimp and human sequences.
DIPs can also be referred to as indels.
These results suggest that InDels were often involved in adaptation and stress tolerance.
However, he found a much larger number of indels.
Hence two small indels should have a worse score than one large one.
Accordingly, the highest number of associated InDels was found for flowering time.
Manually editing the indels in the data set will allow a more accurate phylogenetic tree.
Other polymorphisms include small deletions or insertions of several nucleotides, referred to as indels.
These indels represent exclusive common ancestry shared among all Burkholderia species.
See also
For example, short-reads contained expected indels can be simulated and alignment attempted.
These indels are all characteristic of the genus and serve as molecular markers for Rickettsia.
In addition, low tiling densities may make capturing of alleles with indels more difficult.
SNPs and indels with a quality score above the threshold are identified as putative polymorphisms.
Homopolymer stretches and indels were ignored . Discussion.
Indels are uncommon in coding regions but common in non-coding regions.
However, not all indels are frameshift mutations.
Indels can be typed by a variety of assays including, but not limited to, marker assays.
Occasionally, AFIP markers may involve indels in the restriction fragment.
No indels were detectable in this assay in samples other that wild-type.
Argemonidium is a sister group to all other Papaver sections, with characteristic indels.
In this step, SNPs and INDELs are detected using available parameters in the software.
PROVEAN web server, A tool to predict the functional effect of amino acid substitutions and indels.
Reads with indels ( insertion or deletion of bases ) are categorized by indel type and tallied.
Other methods for detecting SNPs and Indels include single base extension ( SBE ) methods.
Role of indels and low-complexity regions ( LCRs ) in protein evolution.
Comparative genomics, identification of SNPs, indels and / or major structural rearrangements.
Cyan bars represent total indel coverage ; blue bars represent distribution of 3 ' ends of indels.
Indels and microhomologies, characteristic of error-prone NHEJ, were observed at the target site.
Putative off-target sites with additional mutations did not exhibit detectable indels ( Table 4 ).
Applicants have demonstrated Cas9-mediated indels at the human EMX1 and PVALB loci by SURVEYOR assays.
Key words, cpDNA, intraspecific polymorphism, population genetics, phylogeography, indels.
One study has identified 64 SNVs and 5 indels de novo on average.
That is 17 indels of difference between the Starchild mtDNA and the mtDNA of 33 human haplogroups!
All SNPs ( single nucleotide polymorphisms ) and indels ( insertions / deletions ) were identified.
Moreover, sequencing of 327 amplicons did not detect any indels induced by SpCas9n.
It also detects Indels up to at least 12 bp.
