Examples of 'sequence reads' in a sentence
Meaning of "sequence reads"
sequence reads: Refers to the data generated by sequencing technologies that provide information on the nucleotide sequence of DNA or RNA molecules. This phrase is commonly used in genomics, molecular biology, and bioinformatics to describe the output of sequencing experiments
How to use "sequence reads" in a sentence
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sequence reads
The sequence reads are grouped into families.
Sometimes a sequencing module can manipulate sequence reads.
Errors in the sequence reads are corrected.
Sequence reads may be aligned with sequences in a reference genome.
Determining a consensus sequence based on sequence reads in a family.
Three sequence reads are done per molecule.
This step generates a plurality of genomic fragment sequence reads.
Sequence reads can be qualified for inclusion in the analysis.
The method can be applied to two concurrent sequence reads.
A mapping module may receive sequence reads from a sequencing module.
The method can be applied to two independent sequence reads.
Sequence reads may be obtained only for a selected set of chromosomes.
The resultant millions of sequence reads are processed through software algorithms.
This configuration allows the sequencer to make shorter sequence reads.
A consensus sequence can be from sequence reads of a single strand polynucleotide.
See also
Adapter and sequencing primer sequences were removed from sequence reads.
This facilitated distribution of sequence reads derived from every single sample.
Methods disclosed herein can also comprise grouping sequence reads.
In some cases a counting module counts sequence reads mapped to a reference genome.
Sequence reads can be generated from only one strand of a tagged duplex polynucleotide.
A variety of algorithms are available for converting sequence reads into clonotypes.
Sequence reads that have sufficient mapping and quality scores may be counted.
A sequencing module may transfer sequence reads to a mapping module or counting module.
These technologies generate hundreds of thousands of small sequence reads at one time.
Sequence reads from a group of samples from multiple pregnant females sometimes are utilized.
Sequencing can involve generating multiple sequence reads for each molecule.
Only sequence reads that uniquely align to the reference genome are counted as sequence tags.
By depth is meant the number of individual sequence reads spanning a given region of interest.
Primer and tag sequences were first removed from all individual sequence reads.
A method may include analysis of multiple mapped sequence reads to a plurality of genomic sections.
Raw sequence reads were screened for uncorrupted tagging primers and full length protease.
A variety of alignment algorithms may be applied to the sequence reads and reference sequences.
Sequence reads are compared to one another and a ratio is determined for each mappable position.
A raw count profile is generated from the mapped sequence reads that are counted.
Each family can comprise sequence reads from only one of the template polynucleotides.
The overlapping sequences are then aligned to produce the full set of aligned sequence reads.
Each of the family can comprises sequence reads from one of the template polynucleotides.
Alignment can be used to identify poorly matching locations of the two independent sequence reads.
Generating a contig of the physical map and the sequence reads to build a genome sequence.
The reciprocal sequence reads from bidirectional subtraction further enhanced the definition of transcriptome changes.
The method can comprise grouping with a computer processor the plurality of sequence reads into families.
From both steps unique sequence reads are identified that do not match any other reads.
SBS systems allow for a massive quantity of sequence reads in parallel.
The sequence reads are additionally filtered and trimmed based on Phred quality scores.
The method can also comprise sorting sequence reads into paired reads and unpaired reads.
Quantifying Methods disclosed herein also comprise quantifying sequence reads.
Sequence reads may be obtained only for chromosome Y.
That question and answer sequence reads as follows,.
In one aspect, sequence reads are first converted into candidate clonotypes.
Optionally, determining a quantitative measure of sequence reads in each family.
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