Examples of 'clustal' in a sentence
Meaning of "clustal"
Clustal: Referring to a program or method used in bioinformatics for multiple sequence alignment
How to use "clustal" in a sentence
Basic
Advanced
clustal
Clustal method with weighted residue weight table was used for this report.
This program uses the Clustal method for alignments.
The clustal algorithm groups sequences into clusters by examining the distances between all pairs.
The distance tree was constructed with the Clustal method.
A Clustal method with identity residue weight table is used.
Again the possibilities for DNA probes are obvious from the clustal analysis.
In Bioinformatics Clustal is a series of widely used computer programs for multiple sequence alignment.
Calculation of percentage identities between proteins occurs during the generation of multiple alignments by Clustal.
Clustal W is a general purpose multiple sequence alignment program for DNA or proteins.
Percent similarity between amino acid sequences can be calculated, for example, using the clustal method.
The parameters used for Clustal W alignments are optionally the default settings in the software.
There have been many incarnations of Clustal that are listed below:.
Clustal analysis for amino acid sequence of these δ-endotoxin proteins is shown below.
Current version of Clustal family is ClustalW2.
A clustal alignment of the Mycobacterium species sequences is shown in Table 1.
See also
The similarity between stains was estimated by clustal analysis of the data using GENSTAT5.
In these cases, Clustal Omega outperforms other algorithms across the board.
Alignment was done using DNA STAR-Megalign software, applying the Clustal method with a weighted residue table.
Fig . 13 is a clustal alignment of ssrA gene sequences from M genitalium strains ;.
Preferably, the alignment can be performed using the Clustal Method.
Sequences were aligned using the Clustal method in the MegAlign program ( DNASTAR ).
Fig . 16 is a clustal alignment of ssrA gene sequences from L. monocytogenes strains and the L. innocua strain ;.
Amino acid sequences were aligned using the Clustal W function of MegAlign ( DNAstar ).
Fig . 11 is a clustal alignment of ssrA gene sequences from C. trachomatis strains ;.
Frequently used are, for example, the Clustal series cf . for example Chema et al.
Fig . 14 is a clustal alignment of ssrA gene sequences from N . gonorrhoeae strains ;.
The program uses a clustering algorithm similar to the Clustal program described in reference 201.
Fig . 15 is a clustal alignment of ssrA gene sequences from I . monocytogenes strains ;.
All sequences were aligned using the Clustal method with the PAM 250 weight table.
Fig . 1 is a clustal alignment of E. coli and V. cholerae ssrA gene sequences ;.
This can be carried out using software such as Clustal W2, IDBA-UD or SOAPdenovo.
Fig . 12 is a clustal alignment of ssrA gene sequences from H. pylori strains ;.
The sequences were compared in a multiple alignment using Clustal x ( 1.8 ) and the PAM-Dayhoff matrix.
DNASTAR uses the Clustal algorithm in the Megalign program version 3.12.
The alignment was carried out using the Clustal W program [ 46 ].
Alternatively, the Clustal W method of alignment may be used.
Amino acid sequences were initially aligned using the Clustal V method Higgins and Sharp ( 1989 ) CABIOS vol.
Alignments were constructed with the clustal omega program using default parameters ( Thompson et al . 1997 ).
This symbolic system is used by the Clustal W alignment program ( version 1.7 ).
The sequences were also aligned by the Clustal method using MegAlign ™ ( DNASTAR, Inc. ).
The sequences were aligned using the Clustal method of the MEGALIGN program ( DNAstar, Madison, Wis. ).
