Examples of 'clustalw' in a sentence
Meaning of "clustalw"
clustalw (adjective) - referring to the ClustalW, a popular bioinformatics software for multiple sequence alignment. In this context, it denotes something related to sequence alignment or bioinformatics
How to use "clustalw" in a sentence
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clustalw
The ClustalW program was used for sequence comparisons.
Sequence alignment was performed with ClustalW.
The ClustalW output is a sequence alignment that reflects the relationship between sequences.
The alignment was produced using ClustalW.
ClustalW was used to align the protein sequences.
Sequence alignment was performed using ClustalW.
ClustalW was applied to obtain multiple sequence alignments of gene and protein sequences.
The alignment was confirmed by ClustalW analysis.
The ClustalW program and algorithm is also described in detail in,.
Run multiple alignments with ClustalW.
The sequences were aligned using the program ClustalW from the European Bioinformatics Institute.
The sequences reported from other plants were aligned with ClustalW.
The sequence alignments were carried out with ClustalW and were corrected manually.
The deduced amino acid sequences were compared using the subprogram ClustalW.
The sequences were aligned using the ClustalW alignment program.
See also
Preferably, alignment with ClustalW is performed with the following parameters for pairwise alignment,.
Generated with ClustalW.
The software programs BLAST and ClustalW were used for homology search and multi-sequence alignments, respectively.
Sequence analysis is then performed using the ClustalW alignment algorithm.
Using said ClustalW alignment it was calculated that the polynucleotide according to SEQ . ID.
The inserts were sequenced and aligned using the ClustalW software program.
Figure 2 is a ClustalW alignment of a-ketoglutarate dioxygenases.
Alignment of the sequences was performed with the BioEdit program using the ClustalW alignment algorithm.
Clustal2, The updated versions of both ClustalW and ClustalX with higher accuracy and efficiency.
Alignment of the sequences was performed with the BioEdit program and the ClustalW alignment algorithm.
The ClustalW algorithm of the MacVector 6.0 program was used to construct the alignments.
Therefore a Homology calculation according to clustalW is preferred.
The algorithm ClustalW uses provides a close-to-optimal result almost every time.
A sequence alignment can be produced for example by the ClustalW or BLAST program.
Preferably the ClustalW computer programme Version 1.8 is used to determine the identity.
Homology Homology of multiple sequence alignments and phylogram were generated using ClustalW software.
In one embodiment, it is preferred to use the ClustalW software for performing sequence alignments.
Briefly, the amino acid sequences were multiply aligned using ClustalW.
For example the GCG Wisconsin PileUp or ClustalW program is widely used.
The globular domains of proteins belonging to the C1q complement family were aligned using clustalW.
Parameters for pairwise alignment using the ClustalW program can include,.
Sequences were imported into the Alignment Explorer in Mega, and then aligned using ClustalW.
Multiple sequence alignments were then executed with ClustalW as described in Example 1.
Figures 14A-B show a ClustalW amino acid sequence alignment of the VI sequences.
The alignments were performed using a ClustalW alignment J.
Figure 9, ClustalW alignment of the nucleotide sequences of the MSP-3 family.
As the alignment tool, a plenty of well-known software such as ClustalW can be used.
Figure 6B shows a similar alignment using ClustalW of P. aeruginosa DDAH and arginine deiminase.
The sequences of the various proteins were aligned using ClustalW Thompson, J.
Another possibility is to request the strict Clustalw output format with the option " - output = clustalw aln.
The set of tools performing sequential analysis includes BLAST, InterProScan 5, ClustalW and WebLogo.
Another possibility is to request the strict Clustalw output format with the option " codice 1.
Multiple alignments for each protein-coding gene were produced with ClustalW [ 35 ].
Figure 21 provides an amino acid sequence alignment using ClustalW between the Synechocystis sequence knockouts.
The alignment corresponding to the abovementioned proteins is performed using the ClustalW algorithm ( FIG . 8 ).
