Examples of 'contigs' in a sentence
Meaning of "contigs"
Contig: (noun) short for contigency, a possible but not certain future event or condition
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- plural of contig
How to use "contigs" in a sentence
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contigs
This is useful for the construction of contigs.
The contigs are then connected together by primer walking.
Raw sequence data is assembled into contigs.
Scaffolds consist of overlapping contigs separated by gaps of known length.
The reads are sorted and assembled into contigs.
Contigs therefore provide the framework for hierarchical sequencing.
A shows a gap between genomic contigs.
Misoriented contigs are present in reference genomes at significant rates ex.
This produced five unique contigs.
It then has the set of contigs that it has generated.
Contigs were constructed in two ways.
Some of the nucleotides in the contigs had been previously released.
The BACs identified by each marker were grouped into contigs.
The contigs of each clone are then aligned to generate a physical map.
It then extracts the contigs.
See also
Gaps between sequence contigs were filled by walking with internal primers.
Here are the contigs.
And gaps between the contigs were closed by using specific primers.
The reads that passed the screening were assembled into contigs.
Number of contigs in cluster.
Analysis of different contigs.
These different contigs are used to assemble the draft genome sequence.
Number of contigs.
These different contigs are used to assemble the draft sequences of the transcripts.
Longer patterns of methylation are often lost because smaller contigs still need to be assembled.
The contigs of each clone can then be aligned to generate a physical map.
The subsets are sequenced and assembled into contigs corresponding to individual transcripts.
Contigs can be linked together into scaffolds by following connections between mate pairs.
You can also provide additional contigs that will be used as long reads.
The contigs showing significant sequence homology with plant sesquiterpene synthases were retained.
These fingerprints are compared to identify related clones and to assemble overlapping clones in contigs.
The final assembly of contigs and singletons constituted the chickpea gene index.
The next step is to then bridge the gaps between these contigs to create a scaffold.
By linking the physical contigs to the genetic markers a first integrated map can be obtained.
Consecutively all clusters are assembled with CAPS to result in assembled contigs.
The resulting contigs from the assembly analysis form the basis of polymorphism detection.
Similarity searches were performed between the porcine contigs and the orthologous sequences in human.
These YAC contigs were obtained in the following way.
BLASTX searches of the remaining assembled contigs did not identify additional viruses.
Gaps between contigs were closed by primer walking or through a combinatorial PCR approach.
Sizing was estimated by the size of nonchimeric YAC contigs between two markers.
Contigs of linear genomic sequences from this clone are available from the LLNL.
Genetic distances between selected RFLP markers from within the contigs are shown in centiMorgans.
Chrysalis clusters the Inchworm contigs and constructs complete de Bruijn graphs for each cluster.
Data were reassembled with PHRAP into sequence contigs.
The generated nucleotide sequences were assembled to form contigs and scaffolds by the Newbler assembler.
We used directed sequencing techniques ( primer walking ) to complete sequences and link contigs.
BLASTN searches of the assembled contigs readily identified six RNA viruses in the OSS cells.
The method connects WGS scaffolds to WGP contigs.
In addition, the longer contigs can be screened for polymorphisms.
